Package | Description |
---|---|
de.citec.tcs.alignment |
This module defines the interface for AlignmentAlgorithms as well as some helper classes.
|
de.citec.tcs.alignment.adp |
This package contains a more general approach to construct
AlignmentAlgorithms by relying on the theoretical concept of Algebraic
Dynamic Programming (ADP) as developed by Giegerich et al.
|
de.citec.tcs.alignment.comparators |
This module defines the interfaces for Comparators in the TCS Alignment Toolbox.
|
de.citec.tcs.alignment.csv |
This module permits exporting and importing of Sequence objects to CSV files.
|
de.citec.tcs.alignment.learning |
This module is a custom implementation of the Large Margin
Nearest Neighbor classification scheme of Weinberger, Saul, et al.
|
de.citec.tcs.alignment.parallel |
This module provides a very basic support for the parallel
computing of tasks (Engine class) and entries of a matrix (MatrixEngine).
|
de.citec.tcs.alignment.primitives |
This module contains convenience functions to interface with primitive datatypes more
comfortably.
|
de.citec.tcs.alignment.sequence |
This module contains the sequence datastructure of the
TCS Alignment Toolbox.
|
de.citec.tcs.alignment.visualization |
This module contains means to visualize Alignments.
|
de.citec.tcs.alignment.wrappers |
This module contains some wrappers to make usage of the
TCSAlignmentToolbox easier.
|
Copyright (C) 2016 Benjamin Paaßen, AG Theoretical Computer Science, Centre of Excellence Cognitive Interaction Technology (CITEC), University of Bielefeld, licensed under the AGPL v. 3: http://openresearch.cit-ec.de/projects/tcs . This documentation is licensed under the conditions of CC-BY-SA 4.0: https://creativecommons.org/licenses/by-sa/4.0/